[general]
datafname = your_input_file
streefname = random
ofprefix = your_output_prefix
randseed = -1
availablememory = 512
logevery = 10
saveevery = 100
refinestart = 1
outputeachbettertopology = 1
enforcetermconditions = 1
genthreshfortopoterm = 20000
scorethreshforterm = .05
significanttopochange = 0.05
outputphyliptree = 0
outputmostlyuselessfiles = 0
dontinferproportioninvariant = 0

[master]
nindivs = 4
holdover = 1
selectionintensity = .5
holdoverpenalty = 0
stopgen = 5000000
stoptime = 5000000

startoptprec = .5
minoptprec = .01
numberofprecreductions = 40
topoweight = 1.0
modweight = .05
brlenweight = .2
randnniweight = .2
randsprweight = .3
limsprweight =  .5
intervallength = 100
intervalstostore = 5

limsprrange = 6
meanbrlenmuts = 5
gammashapebrlen = 1000
gammashapemodel = 1000

bootstrapreps = 100
inferinternalstateprobs = 0

-PARALLEL ONLY-
startupdatethresh = 5000
minupdatethresh = 5000
maxrecomindivs = 1

[remote]
nindivs = 4 4
holdover = 1
selectionintensity = .5
holdoverpenalty = 0
stopgen = 10000000
stoptime = 10000000

startoptprec = .5
minoptprec = .01
numberofprecreductions = 40
topoweight = 1.0
modweight = .05
brlenweight = .2
randnniweight = .2
randsprweight = .3
limsprweight =  .5
intervallength = 100
intervalstostore = 5

limsprrange = 6
meanbrlenmuts = 5
gammashapebrlen = 1000
gammashapemodel = 1000

sendinterval = 30