|PHYLIP: Phylogenetic Inference Package - Upload necessary files onto the HPC|
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1. Upload necessary files onto the HPC
First create a directory called phylip inside your home directory. Upload your infile to that directory. For this example I will use an example file from the PHYLIP documentation.
5 13 Alpha AACGTGGCCAAAT Beta AAGGTCGCCAAAC Gamma CATTTCGTCACAA Delta GGTATTTCGGCCT Epsilon GGGATCTCGGCCC
After the uploads your should have one file inside your phylip directory.