Updated path after update
Discussion started by John Schenk , on 03 October 10:33 AM

The path to my MrBayes mpirun is no longer valid after the update. My old path in the submit file was:

mpirun /opt/Bio/mpimrbayes/mb_p

 

When I run this file I get the following error:

*** PLEASE USE 'module load gnu-openmpi' ***

*** Loading module... ***

--------------------------------------------------------------------------

mpirun was unable to launch the specified application as it could not access

or execute an executable:

Executable: /opt/Bio/mpimrbayes/mb_p

Node: hpc-19-5

while attempting to start process rank 0.

 

I searched for, but could not find, where the mb_p file is located. Could you please let me know the path?

 

Thanks,

 

John

 

 

 

Replies
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James Wilgenbusch
Hi John,
HPC has adapted a new directory structure to better support all the software package that we install. Until the web documents are updated to reflect these changes please send a message to support@hpc.fsu.edu and one the HPC staff members will send you the new path information for MrBayes and other software that had to be recompiled.
Monday, 03 October 2011 16:19