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MrBayes: Bayesian inference of phylogenies |
MrBayes is an extremely popular program for the Bayesian inference of phylogenies based on molecular sequence data and/or character state data. It is included in the Rocks Bio Roll and is therefore available on all HPC nodes.
Using MrBayes on HPC
MrBayes is briefly described in the Rocks Bio Roll documentation and extensively documented both in the PDF manual and in a TWiki environment. Also see the excellent description at the Marine Biological Laboratory's Workshop on Molecular Evolution. MrBayes uses NEXUS format input file conventions. Type "mb" at the command line to start MrBayes; type "help" while in the program for commands and options. |
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